Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865248.1_cds_XP_016432284.1_28542
CDS Infomation

[gene=LOC107758949] [db_xref=GeneID:107758949] [protein=putative UPF0481 protein At3g02645] [protein_id=XP_016432284.1] [location=complement(join(11955..13409,13938..14009))] [gbkey=CDS]
Sequence

ATGTCACACTCTATTGAGATTACCCCAATAGATCACCGAACTCCACTGCTTCGTCAAGCA
ACAAAAGATGAGATAGAAGAAGAGAAGAAAGTGGATCATCTAATCGAGAAAAAGGAAACA
AATGGTCAAGATCAAGTCAATAAATCTGCAAATAAAATCATAGATGAAATATATGAGGAT
TTGGACATGAATTCGGCTATGAAATCCACCACCATATTTAAAGTAAGTGTGGGGTTACGT
GAATCAAATCCAGATGCTTATAAGCCAAAGGTGATCTCCATTGGTCCTTACCATAAACAT
AATCCTGAACTTCGCTCCATGGAAAAGTATAAACTACGTTACTTACAGCGATTCCTCCGC
AGGAAAGAGGGGATTGATGTGGAAAGTTGCATTAGGGAACTGGAGGATGAAGCATTAAAG
TGTTATGACGATATAGAGAACCTTGACAGTGATATTGTCGGCAAATTTTCAAAACTACTG
TTACTTGATGGTTGTTTTCTAGTTGAATTCATTCGAGAGCGTTATGGAATATATCCAGAA
GAAGAAGGTTGGATTATCCCTGGAAATTGCATAAGTAATCAAGTACGTCGAGATCTGTTG
TTAGTAGAAAACCAACTTCCTTTCTTTGTCCTCACAAAGCTTCATCACATGACTATGGAT
GATGAAGATGAAATACCATTCACAACAATGGTGAAGTGGATCTTTTTACCTTCATTACCG
AAGATGACCCCTGCATCTTTTAATGAGAGTGAAGGTAATGCCGCAGAAATCAAACATTTA
CTTCAAGTTGTACACATGTCATGTCACCCTTCTAAGATTAAAACTACTAGCCTAACGAAT
CCTAGCATGGAAACAGAACATTCCTGGAAAAGCTTATGTTGTAATCCTTTGCAAATAATT
AGGTCAAAAGATAAGCCAATAGATAAGGACCACCTAACGGGGCATAACGTCATGCCAAAC
GCAACAGAGCTTTCCGAAGCTGGAGTTAGCTTCGTAAAAGTCGGATATATTTATAATAAA
TTGAGGAAAGAAAACTTTGGAGATAACACAAGTTTATTTGATATCAAATTTGAAAACGGG
TTAATGAGAATTCCTAGTTTTAATGTCACTGATAGTACGGAGACTCTCCTGCGTAATCTG
ATAGCATACGAGCAACAGTCGTCTCATGTACGTCCTAGATATTTCAGTGATTTTGCAATT
TTCATGGATTATCTTATTGACTCGGAGAGAGATGTGAATTTGCTTCGCCATAAAGGAATC
ATCAGGAATAGGATAGGGGAGGACAAAGAAATAGCTAGCCTTTTTAACAAGATTGGGAAA
GGGGTCATCGTTTCATCTGAGAACTTCTATTACAAAGAAGAATGCAGAAAATTAGTTCAA
CATTATGAACAACCATGGAACCTAATGAAGGCAAGTTTGAGGCGCAATTATTTTAGTAGT
CCGTGGGTAGGAGCTTCAACTGTGGCAGCTGTCATACTCCTCATACTCACAGCTATGCAG
ACTGTTCTAGCTTTCACTGATGATTAA

Peptide Sequence

PEP ID

XP_016432284.1
PEP Infomation

PREDICTED: putative UPF0481 protein At3g02645 [Nicotiana tabacum]
Sequence

MSHSIEITPIDHRTPLLRQATKDEIEEEKKVDHLIEKKETNGQDQVNKSANKIIDEIYED
LDMNSAMKSTTIFKVSVGLRESNPDAYKPKVISIGPYHKHNPELRSMEKYKLRYLQRFLR
RKEGIDVESCIRELEDEALKCYDDIENLDSDIVGKFSKLLLLDGCFLVEFIRERYGIYPE
EEGWIIPGNCISNQVRRDLLLVENQLPFFVLTKLHHMTMDDEDEIPFTTMVKWIFLPSLP
KMTPASFNESEGNAAEIKHLLQVVHMSCHPSKIKTTSLTNPSMETEHSWKSLCCNPLQII
RSKDKPIDKDHLTGHNVMPNATELSEAGVSFVKVGYIYNKLRKENFGDNTSLFDIKFENG
LMRIPSFNVTDSTETLLRNLIAYEQQSSHVRPRYFSDFAIFMDYLIDSERDVNLLRHKGI
IRNRIGEDKEIASLFNKIGKGVIVSSENFYYKEECRKLVQHYEQPWNLMKASLRRNYFSS
PWVGASTVAAVILLILTAMQTVLAFTDD

Transcript Sequence

Gene sequence data has not been registered.